Energy transfer in nonlinear network models of proteins

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Published 21 December 2009 Europhysics Letters Association
, , Citation F. Piazza and Y.-H. Sanejouand 2009 EPL 88 68001 DOI 10.1209/0295-5075/88/68001

0295-5075/88/6/68001

Abstract

We investigate how nonlinearity and topological disorder affect the energy relaxation of local kicks in coarse-grained network models of proteins. We find that nonlinearity promotes long-range, coherent transfer of substantial energy to specific functional sites, while depressing transfer to generic locations. In some cases, transfer is mediated by the self-localization of discrete breathers at distant locations from the kick, acting as efficient energy-accumulating centers.

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10.1209/0295-5075/88/68001