The problem of the removal of brines from underwater sand pits is studied. The intensity of the removal of brines from the pits due to the changes in the hydrological regime of the river is calculated in three-dimensional approach. It is found that for the flow rates typical for the summer, the removal of brines collected in underwater pits does not occur. At flow rates typical for the spring, there is a fairly intensive removal of accumulated brines. Numerical experiments have shown that the underwater pits can serve as brines batteries, becoming an additional source of river pollution under certain hydrological conditions.